Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 HCG4P8-203ENST00000443049 980 ntBASIC16.18■□□□□ 0.18
NUP43Q8NFH3 SIGLEC30P-201ENST00000455569 941 ntBASIC16.18■□□□□ 0.18
NUP43Q8NFH3 FOSL1P1-201ENST00000511041 816 ntBASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
NUP43Q8NFH3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 AC148477.5-201ENST00000625164 1645 ntBASIC16.17■□□□□ 0.18
NUP43Q8NFH3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 MIR3652-201ENST00000579335 131 ntBASIC16.17■□□□□ 0.18
NUP43Q8NFH3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 AC092053.1-201ENST00000605787 1936 ntBASIC16.17■□□□□ 0.18
NUP43Q8NFH3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.17■□□□□ 0.18
NUP43Q8NFH3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NUP43Q8NFH3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 SPDYE21P-201ENST00000413323 827 ntBASIC16.16■□□□□ 0.18
NUP43Q8NFH3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.16■□□□□ 0.18
NUP43Q8NFH3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms