Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 AC134043.2-201ENST00000624206 2238 ntBASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 AC012317.2-201ENST00000623305 2251 ntBASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RCBTB1Q8NDN9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 METTL21AP1-201ENST00000438852 635 ntBASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 PDPK2P-202ENST00000562415 1191 ntBASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RCBTB1Q8NDN9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 KRT18P28-201ENST00000453838 1332 ntBASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 CEND1P1-201ENST00000451006 455 ntBASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 KRT19P2-202ENST00000557173 1012 ntBASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AC096734.2-201ENST00000562054 433 ntBASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RCBTB1Q8NDN9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 AC025580.3-201ENST00000617932 1424 ntBASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 AL590787.1-201ENST00000568856 1315 ntBASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RCBTB1Q8NDN9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms