Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AC105339.3-201ENST00000560043 636 ntBASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AC108860.2-201ENST00000562760 2183 ntBASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 AC133963.1-201ENST00000504166 1679 ntBASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH20Q8N6Y1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 AC012640.2-201ENST00000561606 901 ntBASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 AC120114.3-201ENST00000611923 658 ntBASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 AC116407.3-201ENST00000623905 1129 ntBASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 IL9RP2-201ENST00000423948 1312 ntBASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH20Q8N6Y1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 AC046185.3-201ENST00000623228 1824 ntBASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 PP12613-201ENST00000424958 2230 ntBASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH20Q8N6Y1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 AL355312.1-201ENST00000407115 2176 ntBASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH20Q8N6Y1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms