Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AL135999.2-201ENST00000622438 1686 ntBASIC16.69■□□□□ 0.26
KRT78Q8N1N4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 AP005117.1-201ENST00000584346 1413 ntBASIC16.69■□□□□ 0.26
KRT78Q8N1N4 SIGLEC16-201ENST00000599858 1437 ntBASIC16.69■□□□□ 0.26
KRT78Q8N1N4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KRT78Q8N1N4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 RBM17P3-201ENST00000417687 1192 ntBASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TSPY19P-201ENST00000418461 509 ntBASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TSPY18P-201ENST00000441642 509 ntBASIC16.68■□□□□ 0.26
KRT78Q8N1N4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 AL732292.2-201ENST00000609649 430 ntBASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT78Q8N1N4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 AC079776.2-201ENST00000641154 1609 ntBASIC16.67■□□□□ 0.26
KRT78Q8N1N4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 AC106795.1-205ENST00000512851 1056 ntBASIC16.67■□□□□ 0.26
KRT78Q8N1N4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 AP001269.4-201ENST00000609611 512 ntBASIC16.67■□□□□ 0.26
KRT78Q8N1N4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT78Q8N1N4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms