Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 KRT8P48-201ENST00000515599 1220 ntBASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AC018470.1-201ENST00000624790 3129 ntBASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 AC046185.3-201ENST00000623228 1824 ntBASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEFF1Q8IYR6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 AL355306.1-201ENST00000415580 579 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SPDYE11-202ENST00000450699 704 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 AC093214.1-201ENST00000511688 1107 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SPDYE9P-201ENST00000570642 692 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 AL390955.2-201ENST00000603032 514 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SPDYE10P-202ENST00000612005 668 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SPDYE8P-202ENST00000612377 668 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 AC009093.7-201ENST00000623853 1223 ntBASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TMEFF1Q8IYR6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 ABALON-201ENST00000629058 1903 ntBASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.08■□□□□ 0.33
TMEFF1Q8IYR6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AC129492.6-201ENST00000611383 1305 ntBASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AC087163.2-201ENST00000457299 853 ntBASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.08■□□□□ 0.32
TMEFF1Q8IYR6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms