Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.8■□□□□ 0.44
NPAS3Q8IXF0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AL671277.1-201ENST00000429656 993 ntBASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 FAM86C2P-203ENST00000528684 1004 ntBASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 AL354751.1-201ENST00000412768 1863 ntBASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS3Q8IXF0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS3Q8IXF0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SPDYE11-202ENST00000450699 704 ntBASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SPDYE9P-201ENST00000570642 692 ntBASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 AC015911.4-201ENST00000588022 1070 ntBASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SPDYE10P-202ENST00000612005 668 ntBASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 SPDYE8P-202ENST00000612377 668 ntBASIC17.77■□□□□ 0.44
NPAS3Q8IXF0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms