Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RP1L1Q8IWN7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RP1L1Q8IWN7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 AL358472.5-202ENST00000641448 1267 ntBASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 PI4KAP1-204ENST00000612579 1703 ntBASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 GGTLC5P-201ENST00000617623 998 ntBASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
RP1L1Q8IWN7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AC007274.1-201ENST00000439805 662 ntBASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 AC093520.2-201ENST00000561830 333 ntBASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RP1L1Q8IWN7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 WIZP1-201ENST00000531444 2299 ntBASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 AC097637.2-201ENST00000624096 1997 ntBASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 FAM207CP-201ENST00000443486 507 ntBASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 RPS15P9-201ENST00000494093 319 ntBASIC15.6■□□□□ 0.09
RP1L1Q8IWN7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms