Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF135Q8IUD6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 BCAR1-209ENST00000546196 1340 ntBASIC18.31■□□□□ 0.52
RNF135Q8IUD6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.31■□□□□ 0.52
RNF135Q8IUD6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 IGLL3P-201ENST00000412472 434 ntBASIC18.31■□□□□ 0.52
RNF135Q8IUD6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 AJ011932.1-201ENST00000621707 465 ntBASIC18.31■□□□□ 0.52
RNF135Q8IUD6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF135Q8IUD6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 LETM1P2-201ENST00000597330 2178 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 MRPL20P1-201ENST00000400819 433 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 AC004461.1-201ENST00000412461 403 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 RPS15P9-201ENST00000494093 319 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 RNA5SP421-201ENST00000516864 134 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 AC109322.1-201ENST00000524499 1264 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 KRT19P2-202ENST00000557173 1012 ntBASIC18.3■□□□□ 0.52
RNF135Q8IUD6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF135Q8IUD6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AP000997.3-201ENST00000623333 2250 ntBASIC18.29■□□□□ 0.52
RNF135Q8IUD6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 FAM86GP-201ENST00000448322 971 ntBASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AC012645.4-201ENST00000610691 1061 ntBASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AC010507.1-201ENST00000633895 436 ntBASIC18.29■□□□□ 0.52
RNF135Q8IUD6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 AC067852.2-201ENST00000590513 2313 ntBASIC18.29■□□□□ 0.52
RNF135Q8IUD6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF135Q8IUD6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms