Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.42■■□□□ 1.02
COL23A1Q86Y22 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AC132938.2-201ENST00000579188 680 ntBASIC21.42■■□□□ 1.02
COL23A1Q86Y22 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AL162274.1-201ENST00000617191 1098 ntBASIC21.42■■□□□ 1.02
COL23A1Q86Y22 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 AL591163.1-201ENST00000641757 987 ntBASIC21.42■■□□□ 1.02
COL23A1Q86Y22 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 AL353732.1-201ENST00000569618 1459 ntBASIC21.41■■□□□ 1.02
COL23A1Q86Y22 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.41■■□□□ 1.02
COL23A1Q86Y22 AC004840.1-201ENST00000636359 365 ntBASIC21.41■■□□□ 1.02
COL23A1Q86Y22 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL23A1Q86Y22 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 AL844908.2-201ENST00000609461 460 ntBASIC21.4■■□□□ 1.02
COL23A1Q86Y22 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL23A1Q86Y22 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
COL23A1Q86Y22 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
COL23A1Q86Y22 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
COL23A1Q86Y22 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC112492.5-201ENST00000421897 457 ntBASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC104794.3-201ENST00000566840 1248 ntBASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 KRT18P55-202ENST00000578578 1546 ntBASIC21.39■■□□□ 1.01
COL23A1Q86Y22 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
COL23A1Q86Y22 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms