Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHD1LQ86WJ1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 AC004817.3-201ENST00000602957 2129 ntBASIC21.32■■□□□ 1
CHD1LQ86WJ1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 SIGLEC16-201ENST00000599858 1437 ntBASIC21.32■■□□□ 1
CHD1LQ86WJ1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.32■■□□□ 1
CHD1LQ86WJ1 AC073592.4-201ENST00000623827 446 ntBASIC21.32■■□□□ 1
CHD1LQ86WJ1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 PCDHA14-201ENST00000506751 2298 ntBASIC21.32■■□□□ 1
CHD1LQ86WJ1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CHD1LQ86WJ1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHD1LQ86WJ1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 AC093458.2-201ENST00000623150 629 ntBASIC21.31■■□□□ 1
CHD1LQ86WJ1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.31■■□□□ 1
CHD1LQ86WJ1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHD1LQ86WJ1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 ACTG1P4-201ENST00000425123 1122 ntBASIC21.3■■□□□ 1
CHD1LQ86WJ1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHD1LQ86WJ1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CHD1LQ86WJ1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 AC079776.2-201ENST00000641154 1609 ntBASIC21.29■■□□□ 1
CHD1LQ86WJ1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHD1LQ86WJ1 MIR1224-201ENST00000408193 85 ntBASIC21.29■■□□□ 1
CHD1LQ86WJ1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.29■■□□□ 1
CHD1LQ86WJ1 AC138894.3-201ENST00000603787 634 ntBASIC21.29■■□□□ 1
CHD1LQ86WJ1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms