Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
MRPL55Q7Z7F7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SBF1P1-201ENST00000444527 5631 ntBASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 KRT18P38-201ENST00000449496 1282 ntBASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 GUSBP12-201ENST00000513727 720 ntBASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 VENTXP5-201ENST00000523979 775 ntBASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 AC006011.2-201ENST00000621313 1158 ntBASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 PC-208ENST00000529047 1607 ntTSL 3 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
MRPL55Q7Z7F7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 LYSMD4-203ENST00000378904 2122 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AD000864.1-201ENST00000624076 2295 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AC211429.1-201ENST00000415277 523 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AC096633.1-201ENST00000422446 749 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AC002558.1-201ENST00000488906 803 ntBASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC11.15□□□□□ -0.62
MRPL55Q7Z7F7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms