Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 MRPL20P1-201ENST00000400819 433 ntBASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 AC010654.1-201ENST00000615722 808 ntBASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
BRAT1Q6PJG6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 FZD10-202ENST00000539839 3282 ntBASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 MED15P5-201ENST00000423150 992 ntBASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 PAWRP1-201ENST00000451083 565 ntBASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 MIR4751-201ENST00000578027 74 ntBASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 AC004790.2-201ENST00000623588 572 ntBASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
BRAT1Q6PJG6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 CROCCP2-202ENST00000412962 2773 ntBASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 CRYGEP-201ENST00000412192 528 ntBASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 VN2R19P-201ENST00000442399 1052 ntBASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 AL671883.3-201ENST00000603274 991 ntBASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BRAT1Q6PJG6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRAT1Q6PJG6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BRAT1Q6PJG6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms