Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 AC036111.1-201ENST00000533973 1582 ntBASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 BX276092.5-203ENST00000456199 560 ntBASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
FOXR1Q6PIV2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 TSPY26P-202ENST00000565928 3884 ntBASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 AC099343.3-201ENST00000605834 2503 ntBASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 NPAP1P7-201ENST00000613027 823 ntBASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.05■□□□□ 0.48
FOXR1Q6PIV2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 AL845331.1-201ENST00000424978 1190 ntBASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 AC246785.2-201ENST00000432512 513 ntBASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 TSSC2-201ENST00000450217 709 ntBASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms