Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 AL353135.1-201ENST00000606729 504 ntBASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 AL135999.2-201ENST00000622438 1686 ntBASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF17Q5VTA0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 IGHV3-65-201ENST00000523210 341 ntBASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 AC010327.4-202ENST00000591484 748 ntBASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 AC055717.3-201ENST00000622967 595 ntBASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 LINC00304-203ENST00000565008 1864 ntBASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF17Q5VTA0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 AC018845.2-201ENST00000568326 409 ntBASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 AC008667.4-201ENST00000607370 168 ntBASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF17Q5VTA0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF17Q5VTA0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
PRAMEF17Q5VTA0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PRAMEF17Q5VTA0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
PRAMEF17Q5VTA0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.22
PRAMEF17Q5VTA0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRAMEF17Q5VTA0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms