Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 AL138918.1-201ENST00000568306 659 ntBASIC21.51■■□□□ 1.03
RC3H1Q5TC82 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RC3H1Q5TC82 SLC25A24-204ENST00000569674 2357 ntBASIC21.51■■□□□ 1.03
RC3H1Q5TC82 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 AC093503.3-201ENST00000624917 2352 ntBASIC21.5■■□□□ 1.03
RC3H1Q5TC82 OR8S1-201ENST00000310194 1080 ntBASIC21.5■■□□□ 1.03
RC3H1Q5TC82 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 AC027369.6-201ENST00000525520 931 ntBASIC21.5■■□□□ 1.03
RC3H1Q5TC82 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 COQ9-214ENST00000567933 882 ntTSL 3 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RC3H1Q5TC82 AC016027.1-202ENST00000607927 1699 ntBASIC21.5■■□□□ 1.03
RC3H1Q5TC82 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 AC142381.1-201ENST00000426099 345 ntBASIC21.49■■□□□ 1.03
RC3H1Q5TC82 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 LY6E-204ENST00000519546 971 ntTSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 AC018529.1-201ENST00000613063 361 ntBASIC21.49■■□□□ 1.03
RC3H1Q5TC82 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.49■■□□□ 1.03
RC3H1Q5TC82 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AIRN-201ENST00000601203 4374 ntBASIC21.48■■□□□ 1.03
RC3H1Q5TC82 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 COX5BP8-201ENST00000416911 349 ntBASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.48■■□□□ 1.03
RC3H1Q5TC82 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RC3H1Q5TC82 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RC3H1Q5TC82 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RC3H1Q5TC82 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms