Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 FST-202ENST00000396947 2538 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AL031284.1-201ENST00000419297 478 ntBASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AP001005.1-201ENST00000571755 1248 ntBASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 SLC25A6P4-201ENST00000586535 553 ntBASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 AL121894.2-201ENST00000602977 491 ntBASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 PGM5P2-202ENST00000637225 1043 ntBASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC01556Q5JQF7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 EGFEM1P-202ENST00000431685 1563 ntBASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 KRT18P27-201ENST00000427733 1299 ntBASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 AC136632.2-201ENST00000512891 861 ntBASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 AC105339.3-201ENST00000560043 636 ntBASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 FAM215A-202ENST00000632077 792 ntBASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01556Q5JQF7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
LINC01556Q5JQF7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms