Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 AC132008.2-207ENST00000454517 770 ntBASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 AC027796.2-201ENST00000575326 344 ntBASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 ZNF259P1-201ENST00000407656 1365 ntBASIC19.32■□□□□ 0.68
HERC4Q5GLZ8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 AC073648.2-201ENST00000510116 352 ntBASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 AC055717.3-201ENST00000622967 595 ntBASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 AC148477.8-201ENST00000624298 468 ntBASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HERC4Q5GLZ8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HERC4Q5GLZ8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 AC139887.3-201ENST00000568585 713 ntBASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
HERC4Q5GLZ8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms