Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COBLL1Q53SF7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.92■□□□□ 0.62
COBLL1Q53SF7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COBLL1Q53SF7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COBLL1Q53SF7 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.92■□□□□ 0.62
COBLL1Q53SF7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 AL590787.1-201ENST00000568856 1315 ntBASIC18.91■□□□□ 0.62
COBLL1Q53SF7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
COBLL1Q53SF7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 AL139288.1-201ENST00000623748 933 ntBASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.9■□□□□ 0.62
COBLL1Q53SF7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COBLL1Q53SF7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
COBLL1Q53SF7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 AC138894.3-201ENST00000603787 634 ntBASIC18.89■□□□□ 0.61
COBLL1Q53SF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
COBLL1Q53SF7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms