Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HMGCS1Q01581 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 TP73-AS1-210ENST00000637775 1455 ntBASIC16.67■□□□□ 0.26
HMGCS1Q01581 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.67■□□□□ 0.26
HMGCS1Q01581 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 AL135999.2-201ENST00000622438 1686 ntBASIC16.66■□□□□ 0.26
HMGCS1Q01581 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
HMGCS1Q01581 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 AP002414.4-201ENST00000589764 1148 ntBASIC16.66■□□□□ 0.26
HMGCS1Q01581 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.66■□□□□ 0.26
HMGCS1Q01581 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HMGCS1Q01581 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 AC009336.1-201ENST00000608941 1553 ntBASIC16.65■□□□□ 0.26
HMGCS1Q01581 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 TOB2P1-201ENST00000469761 992 ntBASIC16.65■□□□□ 0.26
HMGCS1Q01581 STK19B-204ENST00000512515 211 ntBASIC16.65■□□□□ 0.26
HMGCS1Q01581 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HMGCS1Q01581 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.65■□□□□ 0.26
HMGCS1Q01581 PCDHA14-201ENST00000506751 2298 ntBASIC16.65■□□□□ 0.26
HMGCS1Q01581 AC079328.2-201ENST00000561241 3354 ntBASIC16.64■□□□□ 0.26
HMGCS1Q01581 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
HMGCS1Q01581 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HMGCS1Q01581 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.64■□□□□ 0.25
HMGCS1Q01581 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 RNF216P1-203ENST00000404404 2427 ntBASIC16.64■□□□□ 0.25
HMGCS1Q01581 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HMGCS1Q01581 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms