Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CXCR4P61073 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.77■□□□□ 0.12
CXCR4P61073 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.77■□□□□ 0.12
CXCR4P61073 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.77■□□□□ 0.12
CXCR4P61073 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.77■□□□□ 0.12
CXCR4P61073 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.77■□□□□ 0.12
CXCR4P61073 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CXCR4P61073 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.77■□□□□ 0.12
CXCR4P61073 AC010947.1-201ENST00000623454 693 ntBASIC15.77■□□□□ 0.12
CXCR4P61073 MTHFR-217ENST00000641820 1569 ntBASIC15.77■□□□□ 0.11
CXCR4P61073 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
CXCR4P61073 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CXCR4P61073 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.77■□□□□ 0.11
CXCR4P61073 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CXCR4P61073 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.77■□□□□ 0.11
CXCR4P61073 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.77■□□□□ 0.11
CXCR4P61073 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CXCR4P61073 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 AC104640.1-201ENST00000562617 2109 ntBASIC15.76■□□□□ 0.11
CXCR4P61073 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.76■□□□□ 0.11
CXCR4P61073 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
CXCR4P61073 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 HMGA1P5-201ENST00000412453 271 ntBASIC15.76■□□□□ 0.11
CXCR4P61073 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.76■□□□□ 0.11
CXCR4P61073 ECEL1P2-202ENST00000465689 757 ntBASIC15.76■□□□□ 0.11
CXCR4P61073 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CXCR4P61073 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.76■□□□□ 0.11
CXCR4P61073 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 FAM87A-204ENST00000613235 858 ntBASIC15.76■□□□□ 0.11
CXCR4P61073 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.76■□□□□ 0.11
CXCR4P61073 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CXCR4P61073 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CXCR4P61073 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CXCR4P61073 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CXCR4P61073 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.75■□□□□ 0.11
CXCR4P61073 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.75■□□□□ 0.11
CXCR4P61073 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms