Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXG1P55316 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXG1P55316 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.13■□□□□ 0.01
FOXG1P55316 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FOXG1P55316 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
FOXG1P55316 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXG1P55316 AC145285.3-201ENST00000564603 959 ntBASIC15.12■□□□□ 0.01
FOXG1P55316 AC106730.1-201ENST00000566722 1090 ntBASIC15.12■□□□□ 0.01
FOXG1P55316 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXG1P55316 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXG1P55316 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXG1P55316 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXG1P55316 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXG1P55316 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXG1P55316 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FOXG1P55316 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXG1P55316 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FOXG1P55316 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 AC108073.2-201ENST00000464002 357 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 AC108751.1-201ENST00000490852 363 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 Z83851.2-201ENST00000609564 659 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
FOXG1P55316 AC004790.2-201ENST00000623588 572 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 AL805961.1-202ENST00000641562 540 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FOXG1P55316 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXG1P55316 PI4KAP1-204ENST00000612579 1703 ntBASIC15.11■□□□□ 0.01
FOXG1P55316 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.11■□□□□ 0.01
FOXG1P55316 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FOXG1P55316 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FOXG1P55316 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
FOXG1P55316 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FOXG1P55316 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXG1P55316 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 MIR574-201ENST00000385209 96 ntBASIC15.1■□□□□ 0.01
FOXG1P55316 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXG1P55316 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.1■□□□□ 0.01
FOXG1P55316 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms