Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH13P55290 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 PCDHB19P-201ENST00000570871 2371 ntBASIC16.91■□□□□ 0.3
CDH13P55290 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH13P55290 AL031133.1-201ENST00000406807 723 ntBASIC16.91■□□□□ 0.3
CDH13P55290 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH13P55290 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH13P55290 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CDH13P55290 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 STK25P1-201ENST00000585406 838 ntBASIC16.91■□□□□ 0.3
CDH13P55290 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CDH13P55290 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.91■□□□□ 0.3
CDH13P55290 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH13P55290 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.91■□□□□ 0.3
CDH13P55290 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH13P55290 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH13P55290 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 AC092171.3-201ENST00000610122 2651 ntBASIC16.9■□□□□ 0.3
CDH13P55290 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
CDH13P55290 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH13P55290 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH13P55290 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.9■□□□□ 0.3
CDH13P55290 AP005901.3-202ENST00000581653 237 ntBASIC16.9■□□□□ 0.3
CDH13P55290 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH13P55290 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDH13P55290 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDH13P55290 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH13P55290 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH13P55290 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.89■□□□□ 0.3
CDH13P55290 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CDH13P55290 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
CDH13P55290 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.89■□□□□ 0.3
CDH13P55290 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.89■□□□□ 0.3
CDH13P55290 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH13P55290 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH13P55290 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH13P55290 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH13P55290 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH13P55290 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH13P55290 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH13P55290 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH13P55290 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH13P55290 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms