Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Z83836.1-201ENST00000624605 1642 ntBASIC15.86■□□□□ 0.13
CDH11P55287 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
CDH11P55287 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH11P55287 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 PCDHB19P-201ENST00000570871 2371 ntBASIC15.86■□□□□ 0.13
CDH11P55287 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH11P55287 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 BX276092.7-203ENST00000637198 1536 ntBASIC15.86■□□□□ 0.13
CDH11P55287 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.86■□□□□ 0.13
CDH11P55287 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 RNF126P1-202ENST00000569893 925 ntBASIC15.86■□□□□ 0.13
CDH11P55287 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.86■□□□□ 0.13
CDH11P55287 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH11P55287 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDH11P55287 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.86■□□□□ 0.13
CDH11P55287 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDH11P55287 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDH11P55287 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CDH11P55287 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CDH11P55287 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH11P55287 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH11P55287 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.85■□□□□ 0.13
CDH11P55287 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CDH11P55287 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CDH11P55287 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CDH11P55287 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.84■□□□□ 0.13
CDH11P55287 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CDH11P55287 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms