Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.62■□□□□ 0.41
CDH4P55283 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDH4P55283 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
CDH4P55283 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH4P55283 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH4P55283 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH4P55283 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH4P55283 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH4P55283 PCDHB18P-201ENST00000524813 2368 ntBASIC17.62■□□□□ 0.41
CDH4P55283 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH4P55283 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH4P55283 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH4P55283 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.61■□□□□ 0.41
CDH4P55283 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDH4P55283 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDH4P55283 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDH4P55283 MRPL20P1-201ENST00000400819 433 ntBASIC17.61■□□□□ 0.41
CDH4P55283 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 PRSS29P-201ENST00000440800 595 ntBASIC17.61■□□□□ 0.41
CDH4P55283 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 AC004790.2-201ENST00000623588 572 ntBASIC17.61■□□□□ 0.41
CDH4P55283 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 AL023806.1-201ENST00000603994 1649 ntBASIC17.61■□□□□ 0.41
CDH4P55283 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
CDH4P55283 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDH4P55283 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 AC141586.5-201ENST00000624546 2050 ntBASIC17.6■□□□□ 0.41
CDH4P55283 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH4P55283 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDH4P55283 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 MIR574-201ENST00000385209 96 ntBASIC17.6■□□□□ 0.41
CDH4P55283 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CDH4P55283 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.6■□□□□ 0.41
CDH4P55283 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
CDH4P55283 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH4P55283 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 PMS2P1-201ENST00000431037 1228 ntBASIC17.59■□□□□ 0.41
CDH4P55283 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 KRT18P58-201ENST00000527480 1120 ntBASIC17.59■□□□□ 0.41
CDH4P55283 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 MIR4751-201ENST00000578027 74 ntBASIC17.59■□□□□ 0.41
CDH4P55283 AC027601.4-201ENST00000611259 610 ntBASIC17.59■□□□□ 0.41
CDH4P55283 AC010654.1-201ENST00000615722 808 ntBASIC17.59■□□□□ 0.41
CDH4P55283 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH4P55283 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CDH4P55283 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH4P55283 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH4P55283 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH4P55283 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms