Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC092865.5-201ENST00000545435 363 ntBASIC12.66□□□□□ -0.38
APOC4P55056 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 AC010654.1-201ENST00000615722 808 ntBASIC12.66□□□□□ -0.38
APOC4P55056 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOC4P55056 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.66□□□□□ -0.38
APOC4P55056 AL135999.2-201ENST00000622438 1686 ntBASIC12.66□□□□□ -0.38
APOC4P55056 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
APOC4P55056 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
APOC4P55056 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOC4P55056 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC4P55056 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.65□□□□□ -0.38
APOC4P55056 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC4P55056 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC4P55056 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 AC007967.2-201ENST00000432613 625 ntBASIC12.65□□□□□ -0.38
APOC4P55056 DNAJB3-201ENST00000446806 729 ntBASIC12.65□□□□□ -0.38
APOC4P55056 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
APOC4P55056 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.65□□□□□ -0.38
APOC4P55056 AC002347.1-201ENST00000569543 541 ntBASIC12.65□□□□□ -0.38
APOC4P55056 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.65□□□□□ -0.38
APOC4P55056 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
APOC4P55056 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC4P55056 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC4P55056 PI4KAP1-204ENST00000612579 1703 ntBASIC12.65□□□□□ -0.38
APOC4P55056 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC4P55056 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.65□□□□□ -0.39
APOC4P55056 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
APOC4P55056 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC4P55056 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.65□□□□□ -0.39
APOC4P55056 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOC4P55056 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOC4P55056 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC4P55056 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC4P55056 PTCHD3P3-201ENST00000403073 906 ntBASIC12.64□□□□□ -0.39
APOC4P55056 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 MIR3687-2-201ENST00000577708 61 ntBASIC12.64□□□□□ -0.39
APOC4P55056 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOC4P55056 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.64□□□□□ -0.39
APOC4P55056 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms