Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.94■□□□□ 0.62
ATN1P54259 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATN1P54259 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
ATN1P54259 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.93■□□□□ 0.62
ATN1P54259 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.93■□□□□ 0.62
ATN1P54259 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ATN1P54259 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.93■□□□□ 0.62
ATN1P54259 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 HMGB3P14-201ENST00000494195 599 ntBASIC18.93■□□□□ 0.62
ATN1P54259 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC18.93■□□□□ 0.62
ATN1P54259 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.93■□□□□ 0.62
ATN1P54259 KRT8P23-201ENST00000560090 1207 ntBASIC18.93■□□□□ 0.62
ATN1P54259 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC18.93■□□□□ 0.62
ATN1P54259 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATN1P54259 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATN1P54259 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 AC135776.1-201ENST00000319817 2481 ntBASIC18.92■□□□□ 0.62
ATN1P54259 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ATN1P54259 PIN1P1-201ENST00000412108 996 ntBASIC18.92■□□□□ 0.62
ATN1P54259 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 SPDYE22P-201ENST00000582158 798 ntBASIC18.92■□□□□ 0.62
ATN1P54259 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.92■□□□□ 0.62
ATN1P54259 AL136370.1-201ENST00000608166 691 ntBASIC18.92■□□□□ 0.62
ATN1P54259 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.92■□□□□ 0.62
ATN1P54259 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.92■□□□□ 0.62
ATN1P54259 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATN1P54259 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATN1P54259 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 AC020763.4-201ENST00000623414 4170 ntBASIC18.91■□□□□ 0.62
ATN1P54259 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATN1P54259 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.91■□□□□ 0.62
ATN1P54259 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.91■□□□□ 0.62
ATN1P54259 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.91■□□□□ 0.62
ATN1P54259 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATN1P54259 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms