Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 SPDYE13P-201ENST00000445314 798 ntBASIC15.76■□□□□ 0.11
HMGA2P52926 STK19B-204ENST00000512515 211 ntBASIC15.76■□□□□ 0.11
HMGA2P52926 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 AC012306.2-201ENST00000609350 630 ntBASIC15.76■□□□□ 0.11
HMGA2P52926 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGA2P52926 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 PCDHA1-201ENST00000378133 2726 ntBASIC15.76■□□□□ 0.11
HMGA2P52926 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGA2P52926 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGA2P52926 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HMGA2P52926 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 TERF1P1-201ENST00000311003 1181 ntBASIC15.75■□□□□ 0.11
HMGA2P52926 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 AL596275.1-201ENST00000423464 877 ntBASIC15.75■□□□□ 0.11
HMGA2P52926 AL845331.1-201ENST00000424978 1190 ntBASIC15.75■□□□□ 0.11
HMGA2P52926 AL137013.1-201ENST00000432946 1228 ntBASIC15.75■□□□□ 0.11
HMGA2P52926 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGA2P52926 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGA2P52926 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.75■□□□□ 0.11
HMGA2P52926 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGA2P52926 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.75■□□□□ 0.11
HMGA2P52926 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGA2P52926 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGA2P52926 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGA2P52926 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
HMGA2P52926 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
HMGA2P52926 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.74■□□□□ 0.11
HMGA2P52926 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 AC005363.2-201ENST00000618631 242 ntBASIC15.74■□□□□ 0.11
HMGA2P52926 AD001527.2-201ENST00000622994 785 ntBASIC15.74■□□□□ 0.11
HMGA2P52926 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGA2P52926 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGA2P52926 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGA2P52926 AL391256.1-201ENST00000443260 1855 ntBASIC15.74■□□□□ 0.11
HMGA2P52926 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HMGA2P52926 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms