Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.84■□□□□ 0.45
NEK3P51956 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NEK3P51956 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NEK3P51956 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NEK3P51956 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NEK3P51956 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NEK3P51956 AC010460.3-201ENST00000511359 1579 ntBASIC17.83■□□□□ 0.45
NEK3P51956 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
NEK3P51956 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NEK3P51956 AP005117.1-201ENST00000584346 1413 ntBASIC17.83■□□□□ 0.45
NEK3P51956 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NEK3P51956 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.83■□□□□ 0.45
NEK3P51956 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.83■□□□□ 0.45
NEK3P51956 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NEK3P51956 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NEK3P51956 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.83■□□□□ 0.44
NEK3P51956 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
NEK3P51956 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.83■□□□□ 0.44
NEK3P51956 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.83■□□□□ 0.44
NEK3P51956 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.83■□□□□ 0.44
NEK3P51956 SCARNA2-201ENST00000458748 420 ntBASIC17.83■□□□□ 0.44
NEK3P51956 AC122714.2-201ENST00000502787 707 ntBASIC17.83■□□□□ 0.44
NEK3P51956 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.83■□□□□ 0.44
NEK3P51956 AC116407.2-201ENST00000613639 860 ntBASIC17.83■□□□□ 0.44
NEK3P51956 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.83■□□□□ 0.44
NEK3P51956 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NEK3P51956 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
NEK3P51956 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NEK3P51956 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 REXO1L11P-201ENST00000620964 1927 ntBASIC17.82■□□□□ 0.44
NEK3P51956 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.82■□□□□ 0.44
NEK3P51956 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 KRT18P67-201ENST00000432816 1264 ntBASIC17.82■□□□□ 0.44
NEK3P51956 AF186996.4-201ENST00000467186 377 ntBASIC17.82■□□□□ 0.44
NEK3P51956 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.82■□□□□ 0.44
NEK3P51956 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.82■□□□□ 0.44
NEK3P51956 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.82■□□□□ 0.44
NEK3P51956 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.82■□□□□ 0.44
NEK3P51956 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NEK3P51956 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NEK3P51956 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
NEK3P51956 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
NEK3P51956 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NEK3P51956 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.81■□□□□ 0.44
NEK3P51956 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.81■□□□□ 0.44
NEK3P51956 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
NEK3P51956 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.81■□□□□ 0.44
NEK3P51956 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NEK3P51956 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NEK3P51956 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NEK3P51956 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.81■□□□□ 0.44
NEK3P51956 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.81■□□□□ 0.44
NEK3P51956 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.81■□□□□ 0.44
NEK3P51956 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NEK3P51956 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.81■□□□□ 0.44
NEK3P51956 AC073648.2-201ENST00000510116 352 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms