Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.83■□□□□ 0.6
CASP4P49662 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP4P49662 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP4P49662 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CASP4P49662 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 ACTG1P4-201ENST00000425123 1122 ntBASIC18.82■□□□□ 0.6
CASP4P49662 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CASP4P49662 AC079781.3-201ENST00000449110 356 ntBASIC18.82■□□□□ 0.6
CASP4P49662 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.82■□□□□ 0.6
CASP4P49662 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP4P49662 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CASP4P49662 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 AL139288.1-201ENST00000623748 933 ntBASIC18.82■□□□□ 0.6
CASP4P49662 TP73-AS1-207ENST00000624167 988 ntBASIC18.82■□□□□ 0.6
CASP4P49662 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.82■□□□□ 0.6
CASP4P49662 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.82■□□□□ 0.6
CASP4P49662 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CASP4P49662 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CASP4P49662 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CASP4P49662 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.81■□□□□ 0.6
CASP4P49662 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CASP4P49662 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.81■□□□□ 0.6
CASP4P49662 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 AL022326.1-202ENST00000641533 845 ntBASIC18.81■□□□□ 0.6
CASP4P49662 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CASP4P49662 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASP4P49662 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CASP4P49662 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CASP4P49662 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.81■□□□□ 0.6
CASP4P49662 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP4P49662 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP4P49662 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP4P49662 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 AC005915.1-201ENST00000624912 2018 ntBASIC18.8■□□□□ 0.6
CASP4P49662 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CASP4P49662 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.8■□□□□ 0.6
CASP4P49662 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.8■□□□□ 0.6
CASP4P49662 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.8■□□□□ 0.6
CASP4P49662 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CASP4P49662 AC106886.4-201ENST00000623557 2502 ntBASIC18.8■□□□□ 0.6
CASP4P49662 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
CASP4P49662 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CASP4P49662 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms