Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL008721.1-201ENST00000609964 604 ntBASIC21.53■■□□□ 1.04
RFC4P35249 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFC4P35249 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFC4P35249 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.53■■□□□ 1.04
RFC4P35249 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.52■■□□□ 1.04
RFC4P35249 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RFC4P35249 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.52■■□□□ 1.04
RFC4P35249 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC4P35249 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC4P35249 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC4P35249 AC241585.1-201ENST00000433527 519 ntBASIC21.52■■□□□ 1.04
RFC4P35249 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC4P35249 SERBP1P5-201ENST00000510079 1181 ntBASIC21.52■■□□□ 1.04
RFC4P35249 CR383656.12-201ENST00000549567 513 ntBASIC21.52■■□□□ 1.04
RFC4P35249 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.52■■□□□ 1.04
RFC4P35249 AC008267.7-201ENST00000624570 1194 ntBASIC21.52■■□□□ 1.04
RFC4P35249 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RFC4P35249 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.52■■□□□ 1.04
RFC4P35249 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFC4P35249 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.52■■□□□ 1.03
RFC4P35249 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.52■■□□□ 1.03
RFC4P35249 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RFC4P35249 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
RFC4P35249 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.52■■□□□ 1.03
RFC4P35249 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RFC4P35249 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
RFC4P35249 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC4P35249 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RFC4P35249 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.51■■□□□ 1.03
RFC4P35249 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC4P35249 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.51■■□□□ 1.03
RFC4P35249 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC4P35249 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RFC4P35249 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.51■■□□□ 1.03
RFC4P35249 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.51■■□□□ 1.03
RFC4P35249 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RFC4P35249 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.5■■□□□ 1.03
RFC4P35249 AC007274.1-201ENST00000439805 662 ntBASIC21.5■■□□□ 1.03
RFC4P35249 AC004890.2-204ENST00000481968 304 ntBASIC21.5■■□□□ 1.03
RFC4P35249 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 AP000842.3-202ENST00000569238 1080 ntBASIC21.5■■□□□ 1.03
RFC4P35249 MIR4453-201ENST00000584019 89 ntBASIC21.5■■□□□ 1.03
RFC4P35249 AC027307.2-201ENST00000591252 911 ntBASIC21.5■■□□□ 1.03
RFC4P35249 LINC01451-201ENST00000623792 534 ntBASIC21.5■■□□□ 1.03
RFC4P35249 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
RFC4P35249 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RFC4P35249 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RFC4P35249 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC4P35249 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC4P35249 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RFC4P35249 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RFC4P35249 OR8S1-201ENST00000310194 1080 ntBASIC21.49■■□□□ 1.03
RFC4P35249 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.49■■□□□ 1.03
RFC4P35249 MEIS3P1-201ENST00000495167 958 ntBASIC21.49■■□□□ 1.03
RFC4P35249 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.49■■□□□ 1.03
RFC4P35249 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms