Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 DUX4L27-201ENST00000554796 1261 ntBASIC18.67■□□□□ 0.58
HOXC8P31273 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.67■□□□□ 0.58
HOXC8P31273 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.67■□□□□ 0.58
HOXC8P31273 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXC8P31273 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXC8P31273 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXC8P31273 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HOXC8P31273 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 WASH6P-202ENST00000359512 1437 ntBASIC18.66■□□□□ 0.58
HOXC8P31273 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC8P31273 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC8P31273 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
HOXC8P31273 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HOXC8P31273 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC8P31273 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 SPDYE14P-201ENST00000442619 822 ntBASIC18.66■□□□□ 0.58
HOXC8P31273 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC8P31273 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXC8P31273 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXC8P31273 AL031055.1-201ENST00000606362 631 ntBASIC18.66■□□□□ 0.58
HOXC8P31273 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXC8P31273 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HOXC8P31273 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.66■□□□□ 0.58
HOXC8P31273 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXC8P31273 AC093525.9-201ENST00000624961 1746 ntBASIC18.66■□□□□ 0.58
HOXC8P31273 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HOXC8P31273 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC8P31273 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 PMS2P4-201ENST00000412466 1052 ntBASIC18.65■□□□□ 0.58
HOXC8P31273 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXC8P31273 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXC8P31273 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC8P31273 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HOXC8P31273 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC8P31273 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXC8P31273 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXC8P31273 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXC8P31273 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.64■□□□□ 0.58
HOXC8P31273 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC8P31273 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
HOXC8P31273 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HOXC8P31273 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HOXC8P31273 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 MIR346-201ENST00000362234 95 ntBASIC18.64■□□□□ 0.57
HOXC8P31273 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.64■□□□□ 0.57
HOXC8P31273 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 MPDU1-223ENST00000582151 728 ntBASIC18.64■□□□□ 0.57
HOXC8P31273 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.64■□□□□ 0.57
HOXC8P31273 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.64■□□□□ 0.57
HOXC8P31273 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HOXC8P31273 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.64■□□□□ 0.57
HOXC8P31273 FRMD8P1-201ENST00000440433 1524 ntBASIC18.64■□□□□ 0.57
HOXC8P31273 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HOXC8P31273 AL138688.1-201ENST00000624851 1594 ntBASIC18.64■□□□□ 0.57
HOXC8P31273 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms