Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF1P30408 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 HCG4-201ENST00000418983 998 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF1P30408 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC21.24■□□□□ 0.99
TM4SF1P30408 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.24■□□□□ 0.99
TM4SF1P30408 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 AC027369.6-201ENST00000525520 931 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.24■□□□□ 0.99
TM4SF1P30408 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.24■□□□□ 0.99
TM4SF1P30408 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.24■□□□□ 0.99
TM4SF1P30408 AL359881.2-201ENST00000602973 570 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 AC009118.2-201ENST00000613275 655 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 SLC22A20-204ENST00000530038 1673 ntBASIC21.24■□□□□ 0.99
TM4SF1P30408 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM4SF1P30408 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 LYSMD4-203ENST00000378904 2122 ntBASIC21.23■□□□□ 0.99
TM4SF1P30408 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TM4SF1P30408 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.23■□□□□ 0.99
TM4SF1P30408 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.23■□□□□ 0.99
TM4SF1P30408 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.23■□□□□ 0.99
TM4SF1P30408 MIR3909-201ENST00000579518 119 ntBASIC21.23■□□□□ 0.99
TM4SF1P30408 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TM4SF1P30408 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TM4SF1P30408 AC073592.8-201ENST00000624126 511 ntBASIC21.23■□□□□ 0.99
TM4SF1P30408 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF1P30408 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.23■□□□□ 0.99
TM4SF1P30408 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM4SF1P30408 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC21.23■□□□□ 0.99
TM4SF1P30408 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TM4SF1P30408 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
TM4SF1P30408 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.22■□□□□ 0.99
TM4SF1P30408 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.22■□□□□ 0.99
TM4SF1P30408 SPTLC1P1-201ENST00000447199 261 ntBASIC21.22■□□□□ 0.99
TM4SF1P30408 RN7SL692P-201ENST00000464677 288 ntBASIC21.22■□□□□ 0.99
TM4SF1P30408 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.22■□□□□ 0.99
TM4SF1P30408 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC21.22■□□□□ 0.99
TM4SF1P30408 AL031055.1-201ENST00000606362 631 ntBASIC21.22■□□□□ 0.99
TM4SF1P30408 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TM4SF1P30408 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM4SF1P30408 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF1P30408 AC004408.2-201ENST00000623613 2777 ntBASIC21.21■□□□□ 0.99
TM4SF1P30408 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF1P30408 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF1P30408 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TM4SF1P30408 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TM4SF1P30408 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.21■□□□□ 0.99
TM4SF1P30408 HLA-V-201ENST00000429037 534 ntBASIC21.21■□□□□ 0.99
TM4SF1P30408 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.21■□□□□ 0.99
TM4SF1P30408 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.21■□□□□ 0.99
TM4SF1P30408 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM4SF1P30408 LINC00304-203ENST00000565008 1864 ntBASIC21.21■□□□□ 0.99
TM4SF1P30408 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TM4SF1P30408 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TM4SF1P30408 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
TM4SF1P30408 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms