Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
COL4A5P29400 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 AC079776.1-201ENST00000401540 1152 ntBASIC20.46■□□□□ 0.87
COL4A5P29400 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.46■□□□□ 0.87
COL4A5P29400 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.46■□□□□ 0.87
COL4A5P29400 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.46■□□□□ 0.87
COL4A5P29400 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.46■□□□□ 0.87
COL4A5P29400 AC009407.1-201ENST00000568958 598 ntBASIC20.46■□□□□ 0.87
COL4A5P29400 LINC01451-201ENST00000623792 534 ntBASIC20.46■□□□□ 0.87
COL4A5P29400 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.46■□□□□ 0.87
COL4A5P29400 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.46■□□□□ 0.87
COL4A5P29400 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COL4A5P29400 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COL4A5P29400 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.46■□□□□ 0.87
COL4A5P29400 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.46■□□□□ 0.87
COL4A5P29400 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL4A5P29400 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 IGHV3-71-201ENST00000523324 359 ntBASIC20.45■□□□□ 0.86
COL4A5P29400 API5-211ENST00000534695 560 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 BANF1P1-201ENST00000553684 263 ntBASIC20.45■□□□□ 0.86
COL4A5P29400 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 AC004233.3-201ENST00000607794 1269 ntBASIC20.45■□□□□ 0.86
COL4A5P29400 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 AP3S2-216ENST00000617003 1561 ntBASIC20.45■□□□□ 0.86
COL4A5P29400 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.45■□□□□ 0.86
COL4A5P29400 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 LINC00895-201ENST00000629028 1637 ntBASIC20.45■□□□□ 0.86
COL4A5P29400 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.45■□□□□ 0.86
COL4A5P29400 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.45■□□□□ 0.86
COL4A5P29400 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.45■□□□□ 0.86
COL4A5P29400 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
COL4A5P29400 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.45■□□□□ 0.86
COL4A5P29400 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL4A5P29400 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A5P29400 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A5P29400 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COL4A5P29400 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A5P29400 AC138028.4-201ENST00000564984 1845 ntBASIC20.44■□□□□ 0.86
COL4A5P29400 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COL4A5P29400 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.44■□□□□ 0.86
COL4A5P29400 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.44■□□□□ 0.86
COL4A5P29400 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.44■□□□□ 0.86
COL4A5P29400 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.44■□□□□ 0.86
COL4A5P29400 AC018529.1-201ENST00000613063 361 ntBASIC20.44■□□□□ 0.86
COL4A5P29400 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL4A5P29400 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.44■□□□□ 0.86
COL4A5P29400 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A5P29400 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.43■□□□□ 0.86
COL4A5P29400 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COL4A5P29400 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A5P29400 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL4A5P29400 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.43■□□□□ 0.86
COL4A5P29400 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.43■□□□□ 0.86
COL4A5P29400 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.43■□□□□ 0.86
COL4A5P29400 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms