Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
SHC1P29353 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC1P29353 AL450487.1-201ENST00000426799 995 ntBASIC15.86■□□□□ 0.13
SHC1P29353 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC1P29353 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.86■□□□□ 0.13
SHC1P29353 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.86■□□□□ 0.13
SHC1P29353 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.86■□□□□ 0.13
SHC1P29353 AC109462.3-201ENST00000573934 613 ntBASIC15.86■□□□□ 0.13
SHC1P29353 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.86■□□□□ 0.13
SHC1P29353 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 AP001269.4-201ENST00000609611 512 ntBASIC15.86■□□□□ 0.13
SHC1P29353 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC1P29353 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.86■□□□□ 0.13
SHC1P29353 AL049757.1-201ENST00000616842 1596 ntBASIC15.86■□□□□ 0.13
SHC1P29353 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SHC1P29353 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHC1P29353 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SHC1P29353 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.85■□□□□ 0.13
SHC1P29353 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.85■□□□□ 0.13
SHC1P29353 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.85■□□□□ 0.13
SHC1P29353 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.85■□□□□ 0.13
SHC1P29353 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.85■□□□□ 0.13
SHC1P29353 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.85■□□□□ 0.13
SHC1P29353 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
SHC1P29353 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SHC1P29353 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHC1P29353 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SHC1P29353 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.84■□□□□ 0.13
SHC1P29353 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.84■□□□□ 0.13
SHC1P29353 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 AC133963.1-201ENST00000504166 1679 ntBASIC15.84■□□□□ 0.13
SHC1P29353 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHC1P29353 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.84■□□□□ 0.13
SHC1P29353 AC005104.2-201ENST00000427818 678 ntBASIC15.84■□□□□ 0.13
SHC1P29353 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.84■□□□□ 0.13
SHC1P29353 EMBP1-201ENST00000458200 901 ntBASIC15.84■□□□□ 0.13
SHC1P29353 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms