Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
EPHA3P29320 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
EPHA3P29320 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.84■□□□□ 0.29
EPHA3P29320 FAM8A6P-201ENST00000407496 1135 ntBASIC16.84■□□□□ 0.29
EPHA3P29320 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.84■□□□□ 0.29
EPHA3P29320 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 AC097374.2-201ENST00000618617 1306 ntBASIC16.84■□□□□ 0.29
EPHA3P29320 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 PCDHA1-201ENST00000378133 2726 ntBASIC16.84■□□□□ 0.29
EPHA3P29320 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
EPHA3P29320 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.84■□□□□ 0.29
EPHA3P29320 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.84■□□□□ 0.29
EPHA3P29320 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
EPHA3P29320 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
EPHA3P29320 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
EPHA3P29320 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHA3P29320 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHA3P29320 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
EPHA3P29320 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.83■□□□□ 0.29
EPHA3P29320 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
EPHA3P29320 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
EPHA3P29320 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA3P29320 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.83■□□□□ 0.28
EPHA3P29320 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA3P29320 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.83■□□□□ 0.28
EPHA3P29320 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 ZNF444P1-201ENST00000559497 298 ntBASIC16.83■□□□□ 0.28
EPHA3P29320 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.83■□□□□ 0.28
EPHA3P29320 GPR32P1-201ENST00000601788 811 ntBASIC16.83■□□□□ 0.28
EPHA3P29320 AC019129.2-201ENST00000609837 1235 ntBASIC16.83■□□□□ 0.28
EPHA3P29320 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.83■□□□□ 0.28
EPHA3P29320 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
EPHA3P29320 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
EPHA3P29320 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
EPHA3P29320 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
EPHA3P29320 PCDHB17P-201ENST00000539533 2393 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EPHA3P29320 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 AC026691.1-201ENST00000602502 2017 ntBASIC16.82■□□□□ 0.28
EPHA3P29320 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.82■□□□□ 0.28
EPHA3P29320 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EPHA3P29320 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
EPHA3P29320 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.82■□□□□ 0.28
EPHA3P29320 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
EPHA3P29320 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms