Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.04■□□□□ 0.32
VARSP26640 TOB2P1-201ENST00000469761 992 ntBASIC17.04■□□□□ 0.32
VARSP26640 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
VARSP26640 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.04■□□□□ 0.32
VARSP26640 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
VARSP26640 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.04■□□□□ 0.32
VARSP26640 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VARSP26640 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 LINC00265-3P-201ENST00000447588 903 ntBASIC17.03■□□□□ 0.32
VARSP26640 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.03■□□□□ 0.32
VARSP26640 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
VARSP26640 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
VARSP26640 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VARSP26640 AC233702.3-201ENST00000578656 1387 ntBASIC17.02■□□□□ 0.32
VARSP26640 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.02■□□□□ 0.32
VARSP26640 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.02■□□□□ 0.32
VARSP26640 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.02■□□□□ 0.32
VARSP26640 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
VARSP26640 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.02■□□□□ 0.32
VARSP26640 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.02■□□□□ 0.32
VARSP26640 VENTXP7-201ENST00000475503 772 ntBASIC17.02■□□□□ 0.32
VARSP26640 UNC93B7-201ENST00000509439 705 ntBASIC17.02■□□□□ 0.32
VARSP26640 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.02■□□□□ 0.32
VARSP26640 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.02■□□□□ 0.32
VARSP26640 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.02■□□□□ 0.32
VARSP26640 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.02■□□□□ 0.32
VARSP26640 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VARSP26640 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VARSP26640 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
VARSP26640 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
VARSP26640 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.02■□□□□ 0.31
VARSP26640 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.01■□□□□ 0.31
VARSP26640 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
VARSP26640 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.01■□□□□ 0.31
VARSP26640 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VARSP26640 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
VARSP26640 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.01■□□□□ 0.31
VARSP26640 AL121761.2-201ENST00000598007 1648 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms