Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPN3P26045 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PTPN3P26045 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPN3P26045 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPN3P26045 ACTG1P4-201ENST00000425123 1122 ntBASIC17.61■□□□□ 0.41
PTPN3P26045 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN3P26045 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPN3P26045 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPN3P26045 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPN3P26045 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPN3P26045 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPN3P26045 AC097637.2-201ENST00000624096 1997 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN3P26045 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPN3P26045 RBM17P3-201ENST00000417687 1192 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 BX005266.1-201ENST00000473402 457 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC124947.2-201ENST00000547118 1133 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPN3P26045 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC091304.2-201ENST00000564639 760 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PTPN3P26045 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC012313.10-201ENST00000623509 926 ntBASIC17.6■□□□□ 0.41
PTPN3P26045 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPN3P26045 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTPN3P26045 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPN3P26045 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PTPN3P26045 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PTPN3P26045 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PTPN3P26045 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN3P26045 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms