Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.81□□□□□ -0.04
TNFSF4P23510 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TNFSF4P23510 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.81□□□□□ -0.04
TNFSF4P23510 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.8□□□□□ -0.04
TNFSF4P23510 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.8□□□□□ -0.04
TNFSF4P23510 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 KRT18P67-201ENST00000432816 1264 ntBASIC14.8□□□□□ -0.04
TNFSF4P23510 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 AC079781.3-201ENST00000449110 356 ntBASIC14.8□□□□□ -0.04
TNFSF4P23510 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 BX005266.1-201ENST00000473402 457 ntBASIC14.8□□□□□ -0.04
TNFSF4P23510 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.8□□□□□ -0.04
TNFSF4P23510 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.8□□□□□ -0.04
TNFSF4P23510 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.8□□□□□ -0.04
TNFSF4P23510 MTDHP4-201ENST00000600287 670 ntBASIC14.8□□□□□ -0.04
TNFSF4P23510 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
TNFSF4P23510 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TNFSF4P23510 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TNFSF4P23510 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFSF4P23510 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFSF4P23510 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TNFSF4P23510 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
TNFSF4P23510 NCF1C-201ENST00000438382 1427 ntBASIC14.79□□□□□ -0.04
TNFSF4P23510 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFSF4P23510 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.79□□□□□ -0.04
TNFSF4P23510 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 PCDHB18P-201ENST00000524813 2368 ntBASIC14.79□□□□□ -0.04
TNFSF4P23510 AP002469.2-201ENST00000531724 424 ntBASIC14.79□□□□□ -0.04
TNFSF4P23510 SART3-203ENST00000546611 1184 ntBASIC14.79□□□□□ -0.04
TNFSF4P23510 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFSF4P23510 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.79□□□□□ -0.04
TNFSF4P23510 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.79□□□□□ -0.04
TNFSF4P23510 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 AL773604.1-201ENST00000617417 272 ntBASIC14.79□□□□□ -0.04
TNFSF4P23510 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TNFSF4P23510 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TNFSF4P23510 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFSF4P23510 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms