Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PRMT1-204ENST00000525616 780 ntTSL 220.33■□□□□ 0.851e-6■■■□□ 15.3
RPS3P23396 PRMT1-220ENST00000534676 915 ntTSL 218.31■□□□□ 0.521e-6■■■□□ 15.3
RPS3P23396 PRMT1-203ENST00000524771 713 ntTSL 315.89■□□□□ 0.131e-6■■■□□ 15.3
RPS3P23396 PRMT1-207ENST00000527382 699 ntTSL 312.53□□□□□ -0.41e-6■■■□□ 15.3
RPS3P23396 PRMT1-219ENST00000534465 779 ntTSL 312.53□□□□□ -0.41e-6■■■□□ 15.3
RPS3P23396 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.28■□□□□ 0.528e-10■■■□□ 15.3
RPS3P23396 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC11.44□□□□□ -0.584e-7■■■□□ 15.3
RPS3P23396 LAPTM5-202ENST00000464569 953 ntTSL 515.98■□□□□ 0.154e-7■■■□□ 15.3
RPS3P23396 MCM7-208ENST00000467516 776 ntTSL 210.91□□□□□ -0.663e-11■■■□□ 15.3
RPS3P23396 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.65■□□□□ 0.748e-7■■■□□ 15.3
RPS3P23396 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.76□□□□□ -0.058e-7■■■□□ 15.3
RPS3P23396 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.058e-7■■■□□ 15.3
RPS3P23396 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.7□□□□□ -0.068e-7■■■□□ 15.3
RPS3P23396 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.25□□□□□ -0.138e-7■■■□□ 15.3
RPS3P23396 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.08□□□□□ -0.168e-7■■■□□ 15.3
RPS3P23396 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.07□□□□□ -0.168e-7■■■□□ 15.3
RPS3P23396 HSD17B4-203ENST00000442060 2686 ntTSL 513.62□□□□□ -0.238e-7■■■□□ 15.3
RPS3P23396 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.318e-7■■■□□ 15.3
RPS3P23396 HSD17B4-221ENST00000515235 5540 ntTSL 28.93□□□□□ -0.988e-7■■■□□ 15.3
RPS3P23396 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.16□□□□□ -1.18e-7■■■□□ 15.3
RPS3P23396 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.2□□□□□ -1.268e-7■■■□□ 15.3
RPS3P23396 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.18□□□□□ -1.428e-7■■■□□ 15.3
RPS3P23396 HSD17B4-223ENST00000518349 815 ntTSL 52.4□□□□□ -2.038e-7■■■□□ 15.3
RPS3P23396 TRAP1-208ENST00000573872 656 ntTSL 312.92□□□□□ -0.345e-7■■■□□ 15.3
RPS3P23396 TRAP1-216ENST00000576335 645 ntTSL 511.12□□□□□ -0.635e-7■■■□□ 15.3
RPS3P23396 ACSL3-203ENST00000407441 538 ntTSL 32.72□□□□□ -1.975e-8■■■□□ 15.3
RPS3P23396 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.37□□□□□ -1.239e-7■■■□□ 15.3
RPS3P23396 FLNB-206ENST00000468939 573 ntTSL 212.32□□□□□ -0.444e-12■■■□□ 15.3
RPS3P23396 NDUFA4-206ENST00000492822 566 ntTSL 55.65□□□□□ -1.54e-71■■■□□ 15.3
RPS3P23396 RNF114-205ENST00000623732 569 ntTSL 523.83■■□□□ 1.414e-8■■■□□ 15.3
RPS3P23396 RNF114-208ENST00000625177 580 ntTSL 322.9■■□□□ 1.264e-8■■■□□ 15.3
RPS3P23396 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.94■□□□□ 0.944e-8■■■□□ 15.3
RPS3P23396 RNF114-203ENST00000622999 2438 ntTSL 220.37■□□□□ 0.854e-8■■■□□ 15.3
RPS3P23396 RNF114-204ENST00000623528 624 ntTSL 319.6■□□□□ 0.734e-8■■■□□ 15.3
RPS3P23396 RNF114-206ENST00000624620 565 ntTSL 218.81■□□□□ 0.64e-8■■■□□ 15.3
RPS3P23396 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.544e-8■■■□□ 15.3
RPS3P23396 GTSF1-205ENST00000548538 594 ntTSL 51.39□□□□□ -2.192e-8■■■□□ 15.3
RPS3P23396 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.71□□□□□ -0.851e-8■■■□□ 15.3
RPS3P23396 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.45□□□□□ -1.061e-8■■■□□ 15.3
RPS3P23396 MARCH6-210ENST00000511802 4734 ntTSL 27.46□□□□□ -1.221e-8■■■□□ 15.3
RPS3P23396 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.341e-8■■■□□ 15.3
RPS3P23396 GLDC-203ENST00000463305 652 ntTSL 313.81□□□□□ -0.22e-7■■■□□ 15.3
RPS3P23396 GLDC-213ENST00000639443 2727 ntTSL 1 (best)9.6□□□□□ -0.872e-7■■■□□ 15.3
RPS3P23396 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.23e-12■■■□□ 15.3
RPS3P23396 FDPS-217ENST00000492244 673 ntTSL 311.23□□□□□ -0.614e-8■■■□□ 15.3
RPS3P23396 AP2M1-221ENST00000490151 570 ntTSL 58.26□□□□□ -1.096e-8■■■□□ 15.3
RPS3P23396 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.995e-8■■■□□ 15.3
RPS3P23396 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.24■□□□□ 0.355e-8■■■□□ 15.3
RPS3P23396 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.58■□□□□ 0.245e-8■■■□□ 15.3
RPS3P23396 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.4□□□□□ -0.265e-8■■■□□ 15.3
RPS3P23396 CLSTN3-213ENST00000541953 570 ntTSL 514.69□□□□□ -0.066e-7■■■□□ 15.3
RPS3P23396 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 521.12■□□□□ 0.975e-8■■■□□ 15.3
RPS3P23396 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.765e-8■■■□□ 15.3
RPS3P23396 GPRC5C-210ENST00000582473 584 ntTSL 320.04■□□□□ 0.85e-12■■■□□ 15.3
RPS3P23396 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.043e-7■■■□□ 15.3
RPS3P23396 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC7.57□□□□□ -1.23e-7■■■□□ 15.3
RPS3P23396 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.363e-7■■■□□ 15.3
RPS3P23396 CALM2-208ENST00000489742 522 ntTSL 315.57■□□□□ 0.082e-11■■■□□ 15.3
RPS3P23396 PTK7-213ENST00000481273 3436 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.734e-7■■■□□ 15.3
RPS3P23396 BAG6-262ENST00000470875 1000 ntTSL 521.15■□□□□ 0.984e-10■■■□□ 15.3
RPS3P23396 RPL35A-209ENST00000496582 579 ntTSL 26.82□□□□□ -1.324e-18■■■□□ 15.3
RPS3P23396 SEMA3B-207ENST00000441915 2710 ntTSL 1 (best)16.18■□□□□ 0.184e-7■■■□□ 15.3
RPS3P23396 SHMT2-228ENST00000557302 457 ntTSL 313.3□□□□□ -0.284e-7■■■□□ 15.3
RPS3P23396 STT3A-207ENST00000526364 617 ntTSL 34.13□□□□□ -1.751e-6■■■□□ 15.3
RPS3P23396 SLC3A2-223ENST00000546312 564 ntTSL 29.11□□□□□ -0.951e-6■■■□□ 15.3
RPS3P23396 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.364e-16■■■□□ 15.3
RPS3P23396 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.014e-16■■■□□ 15.3
RPS3P23396 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC12.01□□□□□ -0.494e-16■■■□□ 15.3
RPS3P23396 PDIA6-208ENST00000617249 2344 ntTSL 5 BASIC11.66□□□□□ -0.544e-16■■■□□ 15.3
RPS3P23396 PDIA6-202ENST00000381611 2534 ntTSL 2 BASIC10.05□□□□□ -0.84e-16■■■□□ 15.3
RPS3P23396 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC9.76□□□□□ -0.854e-16■■■□□ 15.3
RPS3P23396 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.61■□□□□ 0.892e-9■■■□□ 15.3
RPS3P23396 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.492e-9■■■□□ 15.3
RPS3P23396 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.86■□□□□ 0.292e-9■■■□□ 15.3
RPS3P23396 JPT1-201ENST00000304834 1633 ntTSL 1 (best)16.48■□□□□ 0.232e-9■■■□□ 15.3
RPS3P23396 JPT1-210ENST00000580380 411 ntTSL 514.66□□□□□ -0.062e-9■■■□□ 15.3
RPS3P23396 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.24□□□□□ -0.292e-9■■■□□ 15.3
RPS3P23396 JPT1-208ENST00000481647 576 ntTSL 5 BASIC12.21□□□□□ -0.452e-9■■■□□ 15.3
RPS3P23396 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.68□□□□□ -0.542e-9■■■□□ 15.3
RPS3P23396 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.17□□□□□ -1.11e-9■■■□□ 15.3
RPS3P23396 SPTAN1-210ENST00000625282 4102 ntTSL 28.92□□□□□ -0.983e-7■■■□□ 15.3
RPS3P23396 TKT-207ENST00000461139 1972 ntTSL 212.58□□□□□ -0.45e-7■■■□□ 15.3
RPS3P23396 ERGIC3-208ENST00000442139 472 ntTSL 312.26□□□□□ -0.459e-8■■■□□ 15.3
RPS3P23396 TRIM28-213ENST00000598355 714 ntTSL 215.75■□□□□ 0.116e-10■■■□□ 15.3
RPS3P23396 COLGALT1-202ENST00000593832 2941 ntTSL 213.65□□□□□ -0.223e-10■■■□□ 15.2
RPS3P23396 PHGDH-217ENST00000641455 312 nt7.23□□□□□ -1.259e-21■■■□□ 15.2
RPS3P23396 FADS2-211ENST00000522359 1654 ntTSL 415.92■□□□□ 0.143e-7■■■□□ 15.2
RPS3P23396 TFRC-205ENST00000426789 354 ntTSL 30.24□□□□□ -2.378e-14■■■□□ 15.2
RPS3P23396 C3-204ENST00000594936 625 ntTSL 215.96■□□□□ 0.156e-52■■■□□ 15.2
RPS3P23396 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.08□□□□□ -1.68e-9■■■□□ 15.2
RPS3P23396 ALB-206ENST00000484992 693 ntTSL 21.11□□□□□ -2.231e-323■■■□□ 15.2
RPS3P23396 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.75■■□□□ 1.715e-7■■■□□ 15.2
RPS3P23396 MRPL38-202ENST00000410030 535 ntTSL 424.37■■□□□ 1.493e-6■■■□□ 15.2
RPS3P23396 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.25e-7■■■□□ 15.2
RPS3P23396 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.155e-7■■■□□ 15.2
RPS3P23396 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.145e-7■■■□□ 15.2
RPS3P23396 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.53■■□□□ 1.045e-7■■■□□ 15.2
RPS3P23396 AMZ2-209ENST00000580548 829 ntTSL 521.39■■□□□ 1.015e-7■■■□□ 15.2
RPS3P23396 AMZ2-207ENST00000578175 2276 ntTSL 521.3■■□□□ 15e-7■■■□□ 15.2
RPS3P23396 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.995e-7■■■□□ 15.2
Retrieved 100 of 24,271 protein–RNA pairs in 316 ms