Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 IGHGP-201ENST00000390555 1178 ntBASIC16.66■□□□□ 0.26
CAPN3P20807 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 AC068472.1-201ENST00000474589 881 ntBASIC16.66■□□□□ 0.26
CAPN3P20807 AC010460.3-201ENST00000511359 1579 ntBASIC16.66■□□□□ 0.26
CAPN3P20807 AC092068.3-201ENST00000587894 2016 ntBASIC16.66■□□□□ 0.26
CAPN3P20807 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
CAPN3P20807 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CAPN3P20807 AC012313.10-201ENST00000623509 926 ntBASIC16.66■□□□□ 0.26
CAPN3P20807 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAPN3P20807 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.66■□□□□ 0.26
CAPN3P20807 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.66■□□□□ 0.26
CAPN3P20807 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 AC008894.3-201ENST00000624324 3103 ntBASIC16.65■□□□□ 0.26
CAPN3P20807 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CAPN3P20807 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.65■□□□□ 0.26
CAPN3P20807 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
CAPN3P20807 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN3P20807 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.65■□□□□ 0.26
CAPN3P20807 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.65■□□□□ 0.26
CAPN3P20807 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.65■□□□□ 0.26
CAPN3P20807 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAPN3P20807 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN3P20807 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN3P20807 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
CAPN3P20807 AL353692.3-201ENST00000407031 1396 ntBASIC16.64■□□□□ 0.26
CAPN3P20807 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CAPN3P20807 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN3P20807 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN3P20807 CICP6-201ENST00000457191 2729 ntBASIC16.64■□□□□ 0.25
CAPN3P20807 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN3P20807 KRT8P10-201ENST00000450021 1447 ntBASIC16.64■□□□□ 0.25
CAPN3P20807 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
CAPN3P20807 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms