Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRT4P19013 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KRT4P19013 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.38■□□□□ 0.37
KRT4P19013 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 AC010460.3-201ENST00000511359 1579 ntBASIC17.37■□□□□ 0.37
KRT4P19013 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT4P19013 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 COX5BP2-201ENST00000392354 334 ntBASIC17.37■□□□□ 0.37
KRT4P19013 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 AC124947.2-201ENST00000547118 1133 ntBASIC17.37■□□□□ 0.37
KRT4P19013 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT4P19013 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.37■□□□□ 0.37
KRT4P19013 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.37■□□□□ 0.37
KRT4P19013 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRT4P19013 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRT4P19013 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.37■□□□□ 0.37
KRT4P19013 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
KRT4P19013 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
KRT4P19013 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 HLA-F-220ENST00000434407 884 ntBASIC17.36■□□□□ 0.37
KRT4P19013 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.36■□□□□ 0.37
KRT4P19013 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.36■□□□□ 0.37
KRT4P19013 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.36■□□□□ 0.37
KRT4P19013 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
KRT4P19013 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
KRT4P19013 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms