Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
NELFEP18615 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.13■□□□□ 0.33
NELFEP18615 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFEP18615 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFEP18615 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFEP18615 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFEP18615 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.13■□□□□ 0.33
NELFEP18615 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NELFEP18615 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NELFEP18615 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NELFEP18615 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.12■□□□□ 0.33
NELFEP18615 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 FAM197Y8-203ENST00000450145 560 ntBASIC17.12■□□□□ 0.33
NELFEP18615 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NELFEP18615 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.12■□□□□ 0.33
NELFEP18615 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 AL355877.3-201ENST00000622820 899 ntBASIC17.12■□□□□ 0.33
NELFEP18615 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 HLA-A-201ENST00000376802 1334 ntBASIC17.12■□□□□ 0.33
NELFEP18615 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.12■□□□□ 0.33
NELFEP18615 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.12■□□□□ 0.33
NELFEP18615 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
NELFEP18615 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NELFEP18615 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.11■□□□□ 0.33
NELFEP18615 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.11■□□□□ 0.33
NELFEP18615 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.11■□□□□ 0.33
NELFEP18615 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFEP18615 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.11■□□□□ 0.33
NELFEP18615 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.11■□□□□ 0.33
NELFEP18615 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 AC097374.2-201ENST00000618617 1306 ntBASIC17.11■□□□□ 0.33
NELFEP18615 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NELFEP18615 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NELFEP18615 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.11■□□□□ 0.33
NELFEP18615 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NELFEP18615 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NELFEP18615 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NELFEP18615 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.1■□□□□ 0.33
NELFEP18615 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NELFEP18615 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms