Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPRAP18433 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPRAP18433 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPRAP18433 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPRAP18433 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPRAP18433 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPRAP18433 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.82■□□□□ 0.76
PTPRAP18433 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 AC125807.1-201ENST00000483097 614 ntBASIC19.82■□□□□ 0.76
PTPRAP18433 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.82■□□□□ 0.76
PTPRAP18433 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPRAP18433 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPRAP18433 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PTPRAP18433 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPRAP18433 FO538757.1-201ENST00000623083 1397 ntBASIC19.82■□□□□ 0.76
PTPRAP18433 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 MIR661-201ENST00000384842 89 ntBASIC19.81■□□□□ 0.76
PTPRAP18433 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 AC190387.1-201ENST00000551683 408 ntBASIC19.81■□□□□ 0.76
PTPRAP18433 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PTPRAP18433 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 AL355312.1-201ENST00000407115 2176 ntBASIC19.81■□□□□ 0.76
PTPRAP18433 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPRAP18433 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPRAP18433 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPRAP18433 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
PTPRAP18433 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPRAP18433 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTPRAP18433 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPRAP18433 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PTPRAP18433 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPRAP18433 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPRAP18433 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPRAP18433 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPRAP18433 AC236430.1-201ENST00000402231 743 ntBASIC19.8■□□□□ 0.76
PTPRAP18433 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPRAP18433 UGT1A2P-201ENST00000454886 866 ntBASIC19.8■□□□□ 0.76
PTPRAP18433 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPRAP18433 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPRAP18433 AC140878.1-201ENST00000565277 250 ntBASIC19.8■□□□□ 0.76
PTPRAP18433 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.8■□□□□ 0.76
PTPRAP18433 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPRAP18433 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms