Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 AC067863.1-201ENST00000494933 530 ntBASIC19.07■□□□□ 0.64
SMPD1P17405 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.07■□□□□ 0.64
SMPD1P17405 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.07■□□□□ 0.64
SMPD1P17405 AL512356.2-201ENST00000546955 174 ntBASIC19.07■□□□□ 0.64
SMPD1P17405 LINC01225-203ENST00000563550 1244 ntBASIC19.07■□□□□ 0.64
SMPD1P17405 AL161645.1-201ENST00000622716 1255 ntBASIC19.07■□□□□ 0.64
SMPD1P17405 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.07■□□□□ 0.64
SMPD1P17405 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 AC133963.1-201ENST00000504166 1679 ntBASIC19.07■□□□□ 0.64
SMPD1P17405 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.07■□□□□ 0.64
SMPD1P17405 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
SMPD1P17405 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SMPD1P17405 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SMPD1P17405 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.06■□□□□ 0.64
SMPD1P17405 COX20P2-201ENST00000452636 358 ntBASIC19.06■□□□□ 0.64
SMPD1P17405 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.06■□□□□ 0.64
SMPD1P17405 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.06■□□□□ 0.64
SMPD1P17405 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 AC051619.7-201ENST00000568314 623 ntBASIC19.06■□□□□ 0.64
SMPD1P17405 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.06■□□□□ 0.64
SMPD1P17405 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.06■□□□□ 0.64
SMPD1P17405 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMPD1P17405 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SMPD1P17405 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.05■□□□□ 0.64
SMPD1P17405 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 CNN2P2-201ENST00000443536 909 ntBASIC19.05■□□□□ 0.64
SMPD1P17405 CNN2P3-201ENST00000450201 906 ntBASIC19.05■□□□□ 0.64
SMPD1P17405 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.05■□□□□ 0.64
SMPD1P17405 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.05■□□□□ 0.64
SMPD1P17405 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 MIR4745-201ENST00000577608 62 ntBASIC19.05■□□□□ 0.64
SMPD1P17405 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 AL136317.3-201ENST00000618497 906 ntBASIC19.05■□□□□ 0.64
SMPD1P17405 AP001059.3-201ENST00000619053 235 ntBASIC19.05■□□□□ 0.64
SMPD1P17405 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.05■□□□□ 0.64
SMPD1P17405 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
SMPD1P17405 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.05■□□□□ 0.64
SMPD1P17405 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SMPD1P17405 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMPD1P17405 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.04■□□□□ 0.64
SMPD1P17405 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SMPD1P17405 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.04■□□□□ 0.64
SMPD1P17405 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMPD1P17405 AC135050.7-201ENST00000624508 2218 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms