Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.86■□□□□ 0.45
GJA1P17302 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
GJA1P17302 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.86■□□□□ 0.45
GJA1P17302 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.86■□□□□ 0.45
GJA1P17302 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.86■□□□□ 0.45
GJA1P17302 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GJA1P17302 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.86■□□□□ 0.45
GJA1P17302 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
GJA1P17302 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.86■□□□□ 0.45
GJA1P17302 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 AC135050.7-201ENST00000624508 2218 ntBASIC17.86■□□□□ 0.45
GJA1P17302 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GJA1P17302 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.86■□□□□ 0.45
GJA1P17302 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
GJA1P17302 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
GJA1P17302 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.85■□□□□ 0.45
GJA1P17302 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GJA1P17302 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.85■□□□□ 0.45
GJA1P17302 AC004835.2-201ENST00000603762 682 ntBASIC17.85■□□□□ 0.45
GJA1P17302 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
GJA1P17302 REXO1L3P-201ENST00000622202 1288 ntBASIC17.85■□□□□ 0.45
GJA1P17302 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.85■□□□□ 0.45
GJA1P17302 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
GJA1P17302 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
GJA1P17302 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
GJA1P17302 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.84■□□□□ 0.45
GJA1P17302 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.84■□□□□ 0.45
GJA1P17302 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.84■□□□□ 0.45
GJA1P17302 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.84■□□□□ 0.45
GJA1P17302 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.84■□□□□ 0.45
GJA1P17302 AC107918.2-201ENST00000530817 355 ntBASIC17.84■□□□□ 0.45
GJA1P17302 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.84■□□□□ 0.45
GJA1P17302 AC004449.1-201ENST00000564240 433 ntBASIC17.84■□□□□ 0.45
GJA1P17302 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.84■□□□□ 0.45
GJA1P17302 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 AC022145.2-201ENST00000598203 171 ntBASIC17.84■□□□□ 0.45
GJA1P17302 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.84■□□□□ 0.45
GJA1P17302 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.84■□□□□ 0.45
GJA1P17302 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.84■□□□□ 0.45
GJA1P17302 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.84■□□□□ 0.45
GJA1P17302 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GJA1P17302 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms