Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 PTCHD3P3-201ENST00000403073 906 ntBASIC17.35■□□□□ 0.37
MMP2P08253 TPM4P1-201ENST00000436100 807 ntBASIC17.35■□□□□ 0.37
MMP2P08253 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.35■□□□□ 0.37
MMP2P08253 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 SLC25A6P4-201ENST00000586535 553 ntBASIC17.35■□□□□ 0.37
MMP2P08253 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
MMP2P08253 AL049840.3-201ENST00000602669 611 ntBASIC17.35■□□□□ 0.37
MMP2P08253 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.35■□□□□ 0.37
MMP2P08253 FAM215A-202ENST00000632077 792 ntBASIC17.35■□□□□ 0.37
MMP2P08253 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MMP2P08253 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
MMP2P08253 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MMP2P08253 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP2P08253 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
MMP2P08253 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
MMP2P08253 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.34■□□□□ 0.37
MMP2P08253 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP2P08253 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.34■□□□□ 0.37
MMP2P08253 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.34■□□□□ 0.37
MMP2P08253 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.34■□□□□ 0.37
MMP2P08253 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 PCDHA12-202ENST00000613593 2588 ntBASIC17.34■□□□□ 0.37
MMP2P08253 AC008735.5-201ENST00000623544 497 ntBASIC17.34■□□□□ 0.37
MMP2P08253 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.34■□□□□ 0.37
MMP2P08253 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MMP2P08253 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP2P08253 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
MMP2P08253 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.33■□□□□ 0.37
MMP2P08253 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MMP2P08253 AP002414.3-201ENST00000589352 1468 ntBASIC17.33■□□□□ 0.37
MMP2P08253 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
MMP2P08253 AC243591.1-201ENST00000452967 1364 ntBASIC17.33■□□□□ 0.36
MMP2P08253 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP2P08253 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP2P08253 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP2P08253 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.33■□□□□ 0.36
MMP2P08253 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.33■□□□□ 0.36
MMP2P08253 AC006557.2-201ENST00000592985 1240 ntBASIC17.33■□□□□ 0.36
MMP2P08253 MIR7706-201ENST00000613747 67 ntBASIC17.33■□□□□ 0.36
MMP2P08253 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.33■□□□□ 0.36
MMP2P08253 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.33■□□□□ 0.36
MMP2P08253 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MMP2P08253 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MMP2P08253 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms