Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 AL049597.2-201ENST00000565575 961 ntBASIC15.58■□□□□ 0.08
HLA-DPB1P04440 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 AL391807.1-203ENST00000604392 2365 ntBASIC15.58■□□□□ 0.08
HLA-DPB1P04440 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
HLA-DPB1P04440 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 AL136038.4-201ENST00000603606 1261 ntBASIC15.57■□□□□ 0.08
HLA-DPB1P04440 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 PCDHA1-201ENST00000378133 2726 ntBASIC15.57■□□□□ 0.08
HLA-DPB1P04440 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DPB1P04440 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LINC01311-201ENST00000565162 1445 ntBASIC15.56■□□□□ 0.08
HLA-DPB1P04440 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LINC02012-201ENST00000608206 1725 ntBASIC15.56■□□□□ 0.08
HLA-DPB1P04440 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 AC011270.2-201ENST00000624293 2550 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms