Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.78■□□□□ 0.12
P04436 KRT18P3-201ENST00000451602 1288 ntBASIC15.78■□□□□ 0.12
P04436 AC108073.2-201ENST00000464002 357 ntBASIC15.78■□□□□ 0.12
P04436 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.78■□□□□ 0.12
P04436 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.78■□□□□ 0.12
P04436 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
P04436 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
P04436 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
P04436 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.77■□□□□ 0.12
P04436 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
P04436 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.77■□□□□ 0.12
P04436 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.77■□□□□ 0.12
P04436 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
P04436 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.77■□□□□ 0.12
P04436 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04436 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
P04436 AL590787.1-201ENST00000568856 1315 ntBASIC15.77■□□□□ 0.12
P04436 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
P04436 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
P04436 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.77■□□□□ 0.12
P04436 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04436 MRPL20P1-201ENST00000400819 433 ntBASIC15.77■□□□□ 0.12
P04436 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
P04436 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.77■□□□□ 0.12
P04436 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.77■□□□□ 0.12
P04436 AC007967.2-201ENST00000432613 625 ntBASIC15.77■□□□□ 0.12
P04436 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.77■□□□□ 0.12
P04436 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.77■□□□□ 0.12
P04436 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.77■□□□□ 0.12
P04436 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.77■□□□□ 0.12
P04436 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.77■□□□□ 0.12
P04436 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
P04436 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.77■□□□□ 0.11
P04436 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
P04436 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
P04436 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
P04436 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
P04436 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.76■□□□□ 0.11
P04436 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
P04436 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
P04436 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
P04436 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
P04436 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
P04436 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.76■□□□□ 0.11
P04436 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.76■□□□□ 0.11
P04436 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
P04436 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
P04436 AC004790.2-201ENST00000623588 572 ntBASIC15.76■□□□□ 0.11
P04436 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.76■□□□□ 0.11
P04436 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
P04436 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
P04436 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
P04436 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.75■□□□□ 0.11
P04436 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
P04436 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
P04436 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 PRSS29P-201ENST00000440800 595 ntBASIC15.75■□□□□ 0.11
P04436 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.75■□□□□ 0.11
P04436 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
P04436 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.75■□□□□ 0.11
P04436 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms