Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.08■□□□□ 0.48
SOD2P04179 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.08■□□□□ 0.48
SOD2P04179 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.08■□□□□ 0.48
SOD2P04179 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SOD2P04179 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.08■□□□□ 0.48
SOD2P04179 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.08■□□□□ 0.48
SOD2P04179 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.08■□□□□ 0.48
SOD2P04179 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.08■□□□□ 0.48
SOD2P04179 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.08■□□□□ 0.48
SOD2P04179 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.08■□□□□ 0.48
SOD2P04179 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.08■□□□□ 0.48
SOD2P04179 AL096865.1-201ENST00000606796 927 ntBASIC18.08■□□□□ 0.48
SOD2P04179 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.08■□□□□ 0.48
SOD2P04179 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.08■□□□□ 0.48
SOD2P04179 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOD2P04179 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.07■□□□□ 0.48
SOD2P04179 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.07■□□□□ 0.48
SOD2P04179 BCL2-203ENST00000589955 5011 ntBASIC18.07■□□□□ 0.48
SOD2P04179 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 AC020763.4-201ENST00000623414 4170 ntBASIC18.07■□□□□ 0.48
SOD2P04179 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.07■□□□□ 0.48
SOD2P04179 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SOD2P04179 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.07■□□□□ 0.48
SOD2P04179 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SOD2P04179 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.07■□□□□ 0.48
SOD2P04179 BCRP1-201ENST00000444246 691 ntBASIC18.07■□□□□ 0.48
SOD2P04179 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.07■□□□□ 0.48
SOD2P04179 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SOD2P04179 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SOD2P04179 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOD2P04179 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.07■□□□□ 0.48
SOD2P04179 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SOD2P04179 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 KRT18P32-201ENST00000424695 1287 ntBASIC18.06■□□□□ 0.48
SOD2P04179 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 AC069335.1-201ENST00000489972 472 ntBASIC18.06■□□□□ 0.48
SOD2P04179 AC067863.1-201ENST00000494933 530 ntBASIC18.06■□□□□ 0.48
SOD2P04179 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 DUX4L17-201ENST00000557360 1267 ntBASIC18.06■□□□□ 0.48
SOD2P04179 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SOD2P04179 AL009183.1-201ENST00000603760 355 ntBASIC18.06■□□□□ 0.48
SOD2P04179 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.06■□□□□ 0.48
SOD2P04179 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 AL353732.1-201ENST00000569618 1459 ntBASIC18.06■□□□□ 0.48
SOD2P04179 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SOD2P04179 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
SOD2P04179 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SOD2P04179 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
SOD2P04179 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.05■□□□□ 0.48
SOD2P04179 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SOD2P04179 AC109635.5-201ENST00000533593 962 ntBASIC18.05■□□□□ 0.48
SOD2P04179 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.05■□□□□ 0.48
SOD2P04179 AC005498.2-205ENST00000593218 784 ntBASIC18.05■□□□□ 0.48
SOD2P04179 Z92544.3-201ENST00000624747 417 ntBASIC18.05■□□□□ 0.48
SOD2P04179 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms