Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 PAWRP1-201ENST00000451083 565 ntBASIC18.5■□□□□ 0.55
C4BPAP04003 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.5■□□□□ 0.55
C4BPAP04003 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.5■□□□□ 0.55
C4BPAP04003 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 AP001005.1-201ENST00000571755 1248 ntBASIC18.5■□□□□ 0.55
C4BPAP04003 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.5■□□□□ 0.55
C4BPAP04003 AC116407.3-201ENST00000623905 1129 ntBASIC18.5■□□□□ 0.55
C4BPAP04003 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
C4BPAP04003 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
C4BPAP04003 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.5■□□□□ 0.55
C4BPAP04003 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C4BPAP04003 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
C4BPAP04003 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
C4BPAP04003 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.49■□□□□ 0.55
C4BPAP04003 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.49■□□□□ 0.55
C4BPAP04003 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.49■□□□□ 0.55
C4BPAP04003 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.49■□□□□ 0.55
C4BPAP04003 RPS15P9-201ENST00000494093 319 ntBASIC18.49■□□□□ 0.55
C4BPAP04003 AC136632.2-201ENST00000512891 861 ntBASIC18.49■□□□□ 0.55
C4BPAP04003 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.49■□□□□ 0.55
C4BPAP04003 AL356488.2-201ENST00000602755 427 ntBASIC18.49■□□□□ 0.55
C4BPAP04003 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
C4BPAP04003 AL805961.1-202ENST00000641562 540 ntBASIC18.49■□□□□ 0.55
C4BPAP04003 AC243591.1-201ENST00000452967 1364 ntBASIC18.49■□□□□ 0.55
C4BPAP04003 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.49■□□□□ 0.55
C4BPAP04003 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C4BPAP04003 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.49■□□□□ 0.55
C4BPAP04003 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.49■□□□□ 0.55
C4BPAP04003 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
C4BPAP04003 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.48■□□□□ 0.55
C4BPAP04003 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C4BPAP04003 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
C4BPAP04003 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 AC026396.1-201ENST00000419388 421 ntBASIC18.48■□□□□ 0.55
C4BPAP04003 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.48■□□□□ 0.55
C4BPAP04003 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 DUX4L17-201ENST00000557360 1267 ntBASIC18.48■□□□□ 0.55
C4BPAP04003 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.48■□□□□ 0.55
C4BPAP04003 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
C4BPAP04003 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
C4BPAP04003 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C4BPAP04003 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.48■□□□□ 0.55
C4BPAP04003 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
C4BPAP04003 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
C4BPAP04003 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.47■□□□□ 0.55
C4BPAP04003 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.47■□□□□ 0.55
C4BPAP04003 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C4BPAP04003 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.47■□□□□ 0.55
C4BPAP04003 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.47■□□□□ 0.55
C4BPAP04003 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.47■□□□□ 0.55
C4BPAP04003 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.47■□□□□ 0.55
C4BPAP04003 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms